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DNA-FISH & Genomic Imaging

Fluorescence in situ hybridization with multi-channel detection

Perform DNA-FISH experiments on the openUC2 platform. Multi-channel fluorescence imaging with automated tile scanning enables detection of specific genomic loci, chromosomal aberrations, and gene copy number variations. The open software stack integrates with existing FISH analysis tools.

DNA-FISH & Genomic Imaging application example

Technical specifications

ExcitationMulti-channel LED (405/470/530/590/630 nm)
DetectionUp to 5 fluorescence channels
Objectives40x-100x oil immersion recommended
Z-stacks0.2-1 um step size for 3D FISH analysis
Tile scanningAutomated multi-position acquisition
AnalysisCompatible with FISH analysis tools (FISHquant, BigFISH)

Key capabilities

Multi-channel detection

Image up to 5 fluorescence channels for multi-probe FISH experiments.

Z-stack acquisition

Capture 3D volumes for accurate spot detection and localization.

Automated scanning

Scan multiple fields of view and hundreds of cells automatically.

Open analysis pipeline

Export data for analysis in FISHquant, BigFISH, or custom Python scripts.

On the roadmap

Integrated spot detection in ImSwitch
Sequential FISH (seqFISH) protocol support
Automated cell segmentation and spot assignment

Interested in dna-fish & genomic imaging?

Tell us about your imaging needs and we'll help you find the right configuration.